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TopologyNet Binding Affinity Prediction

Predictor for protein-ligand binding affinity based on persistent homology and convolutional neural network.

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User Guide

Input
(The 3D structures of protein and ligand in bound position.)
  • Protein File: The protein file in PDB format.
  • Ligand File: The ligand file in mol2 format.
Get your result
  • Through Email: Once the job is done, an email with a download link will be sent.

Reference

[1] Cang Z, Wei G (2017) TopologyNet: Topology based deep convolutional and multi-task neural networks for biomolecular property predictions. PLOS Computational Biology 13(7): e1005690. https://doi.org/10.1371/journal.pcbi.1005690

Contact


Contact us: wei@math.msu.edu

Webmaster: Zixuan Cang